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Project.toml
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name = "Phylo"
uuid = "aea672f4-3940-5932-aa44-993d1c3ff149"
license = "BSD-2-Clause"
authors = ["Richard Reeve <richard.reeve@glasgow.ac.uk>", "Emily Davison", "Michael Borregaard", "Claire Harris"]
version = "0.6.0"
[deps]
AxisArrays = "39de3d68-74b9-583c-8d2d-e117c070f3a9"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
Distances = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
DynamicPPL = "366bfd00-2699-11ea-058f-f148b4cae6d8"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
IterableTables = "1c8ee90f-4401-5389-894e-7a04a3dc0f4d"
LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
Missings = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
Optim = "429524aa-4258-5aef-a3af-852621145aeb"
ParserCombinator = "fae87a5f-d1ad-5cf0-8f61-c941e1580b46"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
Requires = "ae029012-a4dd-5104-9daa-d747884805df"
SimpleTraits = "699a6c99-e7fa-54fc-8d76-47d257e15c1d"
StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
Tokenize = "0796e94c-ce3b-5d07-9a54-7f471281c624"
Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"
[weakdeps]
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
RCall = "6f49c342-dc21-5d91-9882-a32aef131414"
Requires = "ae029012-a4dd-5104-9daa-d747884805df"
[extensions]
PhyloRCallExt = "RCall"
[compat]
AxisArrays = "0.4"
DataFrames = "1"
DataStructures = "0.17, 0.18"
Distances = "0.10"
Distributions = "0.24, 0.25"
DynamicPPL = "0.28, 0.29, 0.30"
ForwardDiff = "0.10"
Git = "1"
Graphs = "1"
IterableTables = "1"
JuliaFormatter = "1"
LinearAlgebra = "1.6"
Logging = "1"
Missings = "1"
Optim = "1"
ParserCombinator = "2"
Pkg = "1.6"
Plots = "1"
Printf = "1.6"
RCall = "0.13, 0.14"
Random = "1.6"
RecipesBase = "1"
Requires = "1"
ResearchSoftwareMetadata = "0.1.1"
SimpleTraits = "0.9"
StaticArrays = "1"
Statistics = "1.6"
Test = "1.6"
Tokenize = "0.5"
Unitful = "1"
julia = "1.6"
[[author_details]]
name = "Richard Reeve"
orcid = "0000-0003-2589-8091"
[[author_details.affiliation]]
ror = "00vtgdb53"
[[author_details]]
name = "Emily Davison"
orcid = "0009-0000-3656-8309"
[[author_details.affiliation]]
ror = "00vtgdb53"
[[author_details]]
name = "Michael Borregaard"
orcid = "0000-0002-8146-8435"
[[author_details.affiliation]]
ror = "035b05819"
[[author_details]]
name = "Claire Harris"
orcid = "0000-0003-0852-2340"
[[author_details.affiliation]]
ror = "03jwrz939"
[extras]
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DynamicPPL = "366bfd00-2699-11ea-058f-f148b4cae6d8"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Git = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2"
JuliaFormatter = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
Logging = "56ddb016-857b-54e1-b83d-db4d58db5568"
Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
RCall = "6f49c342-dc21-5d91-9882-a32aef131414"
ResearchSoftwareMetadata = "58378933-4625-47fa-851e-05ee27d397bd"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
[targets]
test = ["DataFrames", "DynamicPPL", "ForwardDiff", "Git", "JuliaFormatter", "Logging", "Pkg", "Plots", "RCall", "ResearchSoftwareMetadata", "Test"]