plotting_pairsplot_flu.py

"""
Created on 20 sep. 2011

.. codeauthor:: jhkwakkel <j.h.kwakkel (at) tudelft (dot) nl>
"""

import matplotlib.pyplot as plt
import numpy as np

from ema_workbench import load_results, ema_logging
from ema_workbench.analysis.pairs_plotting import pairs_lines, pairs_scatter, pairs_density

ema_logging.log_to_stderr(level=ema_logging.DEFAULT_LEVEL)

# load the data
fh = "./data/1000 flu cases no policy.tar.gz"
experiments, outcomes = load_results(fh)

# transform the results to the required format
# that is, we want to know the max peak and the casualties at the end of the
# run
tr = {}

# get time and remove it from the dict
time = outcomes.pop("TIME")

for key, value in outcomes.items():
    if key == "deceased_population_region_1":
        tr[key] = value[:, -1]  # we want the end value
    else:
        # we want the maximum value of the peak
        max_peak = np.max(value, axis=1)
        tr["max peak"] = max_peak

        # we want the time at which the maximum occurred
        # the code here is a bit obscure, I don't know why the transpose
        # of value is needed. This however does produce the appropriate results
        logical = value.T == np.max(value, axis=1)
        tr["time of max"] = time[logical.T]

pairs_scatter(experiments, tr, filter_scalar=False)
pairs_lines(experiments, outcomes)
pairs_density(experiments, tr, filter_scalar=False)
plt.show()