pyproject.toml

[build-system]
requires = ["flit_core >=3.2,<4"]
build-backend = "flit_core.buildapi"

[project]
name = "genes2genes"
authors = [{name = "Dinithi Sumanaweera", email = "ds40@sanger.ac.uk"}]
readme = "README.md"
license = {file = "LICENSE"}
classifiers = [
    "License :: OSI Approved :: MIT License",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Development Status :: 5 - Production/Stable",
]
dynamic = ["version", "description"]
keywords = ["single cell", "trajectory alignment", "dynamic programming"]
dependencies = [
    "anndata",
    "regex",
    "tabulate",
    "gseapy",
    "blitzgsea",
    "torch",
    "scipy",
    "scikit-learn",
    "tqdm",
    "matplotlib",
    "numpy<2",
    "pandas>=2.0.3",
    "seaborn>=0.12.2",
    "leven",

]
requires-python = ">=3.8"

[project.urls]
Home = "https://teichlab.github.io/Genes2Genes"
Repository = "https://github.com/Teichlab/Genes2Genes"